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The Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing by Marco Salemi, Philippe Lemey, Anne-Mieke Vandamme (Paperback, 2009)

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9780521730716, Cambridge University Press. Data Preparation: 2. Recombination: 15. Part VIII. Phylogenetic Inference: 4. Part I. Introduction: 1. This second edition includes six new chapters, covering topics such as Bayesian inference, tree topology testing and the impact of recombination on phylogenies, as well as a detailed section on molecular adaptation.