Mixed-Effects Models in S and S-PLUS by Douglas Bates, Jose Pinheiro (Paperback, 2013)

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Jose Pinheiro, Douglas Bates, Jose Pinheiro, Douglas Bates and Douglas Bates. Much emphasis is placed on the use of graphical displays at the various phases of the model-building process, starting with exploratory plots of the data and concluding with diagnostic plots to assess the adequacy of a fitted model.
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